Similar to most cation diffusion facilitator (CDF) proteins, DR1236 has six putative transmembrane domains (TMDs) http://www.ch.embnet.org/software/TMPRED_form.html. The most conserved region of the buy ATM Kinase Inhibitor CDF protein is the TMD region, which is probably involved in metal transfer
. Sequence alignment was performed with the CLUSTAL W program available on the EMBL web page http://www.ebi.ac.uk. The alignment Sp1552 and DR1236 revealed the presence of highly conserved sequences in metal transfer regions III and VI (Figure 1). Moreover, the DXXXD motif, which is conserved in the manganese efflux protein, was also present in DR1236 (224 DAGVD 230). Figure 1 Sequence alignment of the two manganese efflux proteins. DEIRA, Deinococcus radiodurans R1; STRPN, Streptococcus pneumoniae. The metal transfer regions III and VI are boxed. Identical amino acids and similar amino acids are denoted by black and gray backgrounds, respectively. mntE is essential for the manganese resistance of D. radiodurans To confirm the specific substrate and roles of DR1236 in D. radiodurans, the null mutant of dr1236 (mntE – ) and wild-type revertant mntE strains were constructed (Figure 2). Metals including manganese are essential yet potentially toxic to bacteria . Supplementation
with certain metal ions can inhibit the growth of an exporter system mutant [16, 17]; therefore, this phenotype is used to verify certain mutants. In this study, wild-type R1 and dr1236 (mntE – ) were grown on TGY plates overlaid with discs saturated with 10 μL Capmatinib cost of different metal ion solutions (1 M) containing manganese, magnesium, cobalt, calcium, copper, zinc, nickel, or iron ions. As shown in Figure 3A/B, the growth of the
mntE – mutant was strongly inhibited by the manganese ions, but the mutant grew normally in the presence of other cations. Moreover, the wild-type revertant showed a growth phenotype similar to that of R1, indicating that growth inhibition of the mntE – mutant was due to the interruption of dr1236. Figure 2 mntE – mutant construction and verification by PCR. (A) Ethidium-bromide-stained agarose gel illustrating that the mutant carries a homozygous deletion of dr1236::aadA. these Lane 1, mntE – mutant; lane 2, R1; lane 3, DNA marker. IBET762 Primers M1/M4 were used for PCR. (B) Verification of wild-type revertant mntE by PCR. Lane 1, DNA marker; lane 2, R1; lane 3, revertant mntE. Primers M5/M6 were used for PCR. Figure 3 Manganese sensitivity assay for wild-type R1 and the mntE – mutant. (A) Wild-type R1 (white bars), mntE – (black bars), and WT revertant (gray bars) were cultured on TGY plates overlaid with filter discs saturated with 1 M solutions of various cations. The zone of inhibition was measured from the edge of the disc after three days. *P < 0.01. ND, not determined. (B) The inhibition zone of R1 and mntE – . Cells were cultured on TGY plates overlaid with filter discs saturated with 1 M manganese chloride.